INTERNATIONAL PEER REVIEWED PAPERS (IN JOURNALS WITH IMPACT FACTOR)

10) Pereira-Leal J.B., Abreu I.A., Alabaça C.S., Almeida M.H., Almeida P., Almeida T., Amroim M.I., Araújo S., Azevedo H., Badia A., Batista D., Bohn A., Capote T., Carrasquinho I., Chaves I., Coelho A.C., Ribeiro Costa M.M., Costa R., Cravador A., Egas C., Faro C., Fortes A.M., Fortunato A.S., Gaspar M.J., Gonçalves S., Graça J., Horta H., Inácio V., Leitão J.M., Lino-Neto T., Marum L., Matos J., Mendonça D., Miguel A., Miguel C.M., Morais-Cecílio L., Neves I., Nóbrega F., Oliveira M.M., Oliveira R., Pais M.S., Paiva J.A., Paulo O.S., Pinheiro M., Raimundo J.A.P., Ramalho J.C., Ribeiro A.I., Ribeiro T., Rocheta M., Rodrigues A.I., Rodrigues J.C., Saibo N.J.M., Santo T.E., Santos A.M., Sá-Pereira P., Sebastiana M., Simões F., Sobral R.S., Tavares R., Teixeira R., Varela C., Veloso M.M. & Ricardo C.P.P. 2014. A comprehensive assessment of the transcriptome of cork oak (Quercus suber) through EST sequencing. BMC Genomics 15:371. DOI:10.1186/1471-2164-15-371. (IF2014: 3,986; Q1 Genetics & Heredity)

9) Talhinhas P., Azinheira H.G., Vieira B., Loureiro A., Tavares S., Batista D., Morin E., Petitot A.S., Paulo O.S., Poulain J., Da Silva C., Duplessis S., Silva M.D. & Fernandez D. 2014. Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix with an emphasis on early stages of infection. Frontiers in Plant Science 5(88):1-17. (IF2014: 3,948; Q1 Plant Sciences)

8) Modesto I.S., Miguel C., Pina-Martins F., Glushkova M., Veloso M., Paulo O.S. & Batista D. 2014. Identifying signatures of natural selection in cork oak (Quercus suber L.) genes through SNP analysis. Tree Genetics & Genomes 10(6):1645-1660. (IF2014: 2,451; Q1 Forestry )

7) Silva D.N., Talhinhas P., Cai L., Luzolo M., Guichuru E.K., Loureiro A., Várzea V., Paulo O.S. & Batista D. 2012. Host-jump drives rapid and contemporary ecological speciation of the emergent fungal pathogen Colletotrichum kahawae. Molecular Ecology 21(11):2655-2670. (IF2014: 6.494; Q1 Evolutionary Biology)

6) Silva D.N., Talhinhas P., Várzea V., Cai L., Paulo O.S. & Batista D. 2012. Application of the Apn2/MAT locus to improve the systematics of the Colletotrichum gloeosporioides complex: An example from coffee (Coffea spp.) hosts. Mycologia 104(2):396-409. (IF2014: 2.471; Q2 Mycology)

5) Evaristo, I., Batista, D., Correia, I. & Costa, R. (2010) Chemical profiling of Portuguese Pinus pinea L. Nuts. Journal of the Science of Food and Agriculture, 90 (6): 1041–1049. (IF2014: 1.714; Q1 Agriculture, Multidisciplinary).

4) Ferreira S., Batista D., Serrazina S. & Pais M.S. 2009. Morphogenesis induction and organogenic nodule differentiation in Populus euphratica Oliv. Leaf explants. Plant Cell Tissue and Organ Culture 96(1): 35-43. (IF2014: 2.125; Q2 Plant Sciences)

3)  Batista, D., Fonseca, S., Serrazina, S., Figueiredo, A. & Pais, M.S. (2008). Efficient and stable transformation of hop (Humulus lupulus L.) var. Eroica by particle bombardment. Plant Cell Reports, 27 (7): 1185-1196. (IF2014: 3.071; Q1 Plant Sciences).

2)   Batista, D., Ascensão, L., Sousa, M.J. & Pais, M.S. (2000). Adventitious shoot mass production of hop (Humulus lupulus L.) var. Eroica in liquid medium from organogenic nodule cultures. Plant Science, 151:47-57. (IF2014: 3.607; Q1 Plant Sciences).

1)   Batista, D., Sousa, M.J., Pais, M.S. (1996). Plant regeneration from stem and petiole-derived callus of Humulus lupulus L. (hop) clone Bragança and var. Brewer´s Gold. In vitro Cellular & Developmental Biology - Plant, 32 (1): 37-41. (IF2014 0.981; Q3 Plant Sciences).

OTHER PEER REVIEWED PAPERS

5)  Figueiredo A, Loureiro A, Batista D, Monteiro F, Várzea V, Pais MS, Gichuru EK, Silva MC. (2013). Validation of reference genes for normalization of qPCR gene expression data from Coffea spp. hypocotyls inoculated with Colletotrichum kahawae. BMC Research Notes, 6:388. DOI 10.1186/ 1756-0500-6-388.

4)  Evaristo I, Batista D, Correia I, Correia P, Costa R. (2013). Chemical profiling of Portuguese Pinus pinea L. nuts and comparative analysis with P. koraiensis Sieb & zucc. commercial kernels. In: Mutke S, Piqué M & Calama R (Eds.). “Mediterranean Stone Pine for Agroforestry” - Options Méditerranéennes, Series A, no. 105. CIHEAM, Zaragoza, pp: 99-104. ISBN: 2-85352-508-2.

3) Monteiro F.*, Romeiras M.M.*, Batista D.*, Duarte M.C. (*equally contributed as first authors) (2013). Biodiversity assessment of sugar beet species and its wild relatives: linking ecological data with new genetic approaches. American Journal of Plant Sciences, 4: 21-34. DOI 10.4236/ ajps.2013.48A003.

2) Batista, D., Nunes, V.L., Gomes-Laranjo, J., Paulo, O.S., Costa, R. (2009). Segregation of SSR and AFLP loci in chestnut F1 hybrids (Castanea sativa x C. crenata/C. mollissima). Acta Horticulturae (ISHS) 844: 249-256.

1) Batista, D., Valdiviesso, T., Santos, L., Paulo, O.S., Gomes-Laranjo, J., Costa, R. (2008). Genotyping Castanea sativa x C. crenata and C. sativa x C. mollissima F1 hybrids using nuclear SSRs. Acta Horticulturae (ISHS) 784: 107-112.

BOOKS (Author)

1) Costa R., Evaristo I., Batista D., Afonso S., Carrasquinho I., Sousa E., Inácio L., Bonifácio L., Capelo J., Santos L., Azevedo Gomes J., Vacas de Carvalho M. A. (2008). Condução de Povoamentos de Pinheiro Manso e Características Nutricionais do Pinhão. INRB, IP., Oeiras, 48pp. ISBN 978-989-95658-3-8.

BOOKS CHAPTERS

1) Batista D. 2008. O nascimento da biologia evolutiva: Uma reflexão sobre A Origem das Espécies. In A. Levy, F. Carrapiço, H. Abreu, M. Pina (Eds). Evolução: História e Argumentos. Série Fundamentos e Desafios do Evolucionismo, Vol. 1. Colecção Esfera das Ciências. Esfera do Caos, Lisboa, pp. 53-62. ISBN 978-989-8025-55-5.

PROCEEDINGS OF SYMPOSIA

8) Loureiro A, Figueiredo A, Batista D, Baraldi T, Várzea V, Azinheira HG, Talhinhas P, Pais MS, Gichuru EK, Silva MC (2012). New cytological and molecular data on coffee – Colletotrichum kahawae interactions. In: Association for Science and Information on Coffee (ASIC) [Eds.], Proceedings of the 24th International Conference on Coffee Science, San José, Costa Rica, 11-16 November, 2012, pp: 593-598. ISBN: 978-2-900212-23-3.

7) Silva DN, Vieira A, Talhinhas P, Azinheira HG, Silva MC, Fernandez D, Duplessis S, Paulo OS, Batista D. (2012). Phylogenetic analysis of Hemileia vastatrix and related taxa using a genome-scale approach. In: Association for Science and Information on Coffee (ASIC) [Eds.], Proceedings of the 24th International Conference on Coffee Science, San José, Costa Rica, 11-16 November, 2012, pp: 1404-1408. ISBN: 978-2-900212-23-3.

6) Costa J., Miguel C., Almeida M.H., Oliveira M.M., Matos J.A., Simões F., Veloso M., Ricardo C.P., Paulo O.S., Batista D. (2011). Genetic divergence in Cork Oak based on cpDNA sequence data. BMC Proceedings, 5 (Suppl 7):P13. DOI 10.1186/1753-6561-5-S7-P13.

5)  Batista, D., Guerra-Guimarães, L., Talhinhas, P., Loureiro, A., Silva, D., Gonzalez, L., Pereira, A. P., Vieira, A., Azinheira, H.G., Struck, C., Silva, M.C., Paulo, O.S., Várzea, V. (2010). Analysis of population genetic diversity and differentiation in Hemileia vastatrix by molecular markers. In: Association for Science and Information on Coffee (ASIC) [Eds.], Proceedings of the 23rd International Conference on Coffee Science, Bali, Indonesia, 3-8 October, 2010, pp: 738-742. ISBN: 978-1-61839-210-7.

4) Talhinhas, P., Azinheira, H.G., Loureiro, A., Batista, D., Vieira, B., Pina-Martins, F., Tisserant, E., Petitot, A.S., Paulo, O.S., Duplessis, S., Silva, M.C., Fernandez, D. (2010). Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix. In: Association for Science and Information on Coffee (ASIC) [Eds.], Proceedings of the 23rd International Conference on Coffee Science, Bali, Indonesia, 3-8 October, 2010, pp: 414-422. ISBN: 978-1-61839-210-7.

3) Silva, D., Talhinhas, P., Várzea, V., Loureiro, A., Silva, M.C., Paulo, O. S., Batista, D. (2010). Population structure of Colletotrichum kahawae, the causal agent of coffee berry disease (CBD): Insights from a multi-locus approach. In: Association for Science and Information on Coffee (ASIC) [Eds.], Proceedings of the 23rd International Conference on Coffee Science, Bali, Indonesia, 3-8 October, 2010, pp: 529-536. ISBN: 978-1-61839-210-7.

2) Fortes, A.M., Batista, D., Santos, F., Figueiredo, A., Serrazina, S., Young, H.C., Miersch, O., Lange, P., Wasternack, C., Verpoorte, R., Pais, M.S. (2009). Deciphering morphogenesis for hop improvement. A transcriptomic and metabolomic perspective. In: International Hop Growers Convention, IHGC [Eds.], Proceedings of the IHGC Scientific Commission, Leon, Spain, June 21-25, 2009, pp.35-40.

1) Batista, D., Pais, M.S. (2002). The role of hop´s resistance to fungi in prevention of ochratoxins in raw materials. In: Zoeterwoude (Eds.), Bulletin of the 4th Technical Meeting EBC Brewing Science Group, Porto, 4-6 September, pp: 153-161.