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Computational Biology and Population Genomics - CoBiG2

Ana Sofia Bartolomeu Rodrigues

Past Recent Members

Biogeography Phylogenetics Genomics Evolutionary biology Ecology

I received a Ph.D. in Evolutinary Biology from the University of Lisbon in 2016.  Currently, I am integrated within the project “PATHOmics: Patogenómica da ferrugem do cafeeiro para descobrir mecanismos de virulência e marcadores de diagnóstico” in the CoBiG2. The main purpose of my work is to investigate the molecular basis of virulence divergence and the mechanisms underlying evolution of pathotypes in the coffee fungal Hemileia vastatrix. Therefore, using population genomic resources and data generated in previous projects, comparative genomic, genome-wide association and transcriptomic analyses I am trying to identify SNPs and/or genomic regions that can be associated to virulence profiles of coffee pathogens.

Publications

Seabra, S.G., Rodrigues, A.S.B., Silva, S.E., Neto, A.C., Pina-Martins, F., Marabuto, E., Thompson, V., Wilson, M.R., Yurtsever, S., Halkka, A., Rebelo, M.T., Borges, P.A.V., Quartau, J.A., Jiggins, C.D. & Paulo, O.S. (2021) Population structure, adaptation and divergence of the meadow spittlebug, Philaenus spumarius (Hemiptera, Aphrophoridae), revealed by genomic and morphological data.

PeerJ, 9, e11425. DOI:10.7717/peerj.11425 (IF2021 3,061; Q1 Multidisciplinary Sciences)

Diniz, I., Batista, D., Pena, A.R., Rodrigues, A.S.B., Reis, P., Baldé, A., Indjai, B., Catarino, L. & Monteiro, F. (2020) First report of dieback caused by Neofusicoccum batangarum in cashew in Guinea-Bissau.

Plant Disease, , 1-4. DOI:10.1094/PDIS-10-20-2308-PDN (IF2020 4,438; Q1 Plant Sciences)

Rodrigues, A.S.B., Martins, A., Garcia, C.A., Sérgio, C., Porley, Ron, Fontinha, S., González-Mancebo, J., Gabriel, R., Phephu, N., Van Rooy, J., Dirkse, G., Long, D. Stech, M., Patiño, J. & Sim-Sim, M. (2020) Climate-driven vicariance and long-distance dispersal explain the Rand Flora pattern in the liverwort Exormotheca pustulosa (Marchantiophyta).

, 20, 1-17. DOI:10.1093/biolinnean/blaa071 (IF2020 2,138; Q1 Evolutionary Biology)

Projects

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ERRO 401

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