Diogo Nuno Proença Rico Silva

Publications

Costa, G.J., Nunes, V.L., Marabuto, E., Mendes, R., Silva, D.N., Pons, P., Bas, J.M., Hertach, T., Paulo, O.S. & Simões, P.C. (2023) The effect of the Messinian salinity crisis on the early diversification of the Tettigettalna cicadas.

Zoologica Scripta, 52(1), 100-116. DOI:10.1111/zsc.12571 (IF2022 2,5; Q3 Evolutionary Biology)

Vieira, A., Silva, D.N., Várzea, V., Paulo, O.S. & Batista, D. (2019) Genome-wide signatures of selection in Colletotrichum kahawae reveal candidate genes potentially involved in pathogenicity and aggressiveness.

Frontiers in Microbiology, 10, 1374. DOI:10.3389/fmicb.2019.01374 (IF2019 4,235; Q1 Microbiology)

Vieira, A., Silva, D.N., Várzea, V., Paulo, O.S. & Batista, D. (2018) Novel insights on the colonization routes and evolutionary potential of Colletotrichum kahawae, a severe pathogen of Coffea arabica.

Molecular Plant Pathology, 19(11), 2488-2501. DOI:10.1111/mpp.12726 (IF2018 4,379; Q1 Plant Sciences)

Silva, D.N., Várzea, V., Paulo, O.S. & Batista, D. (2018) Population genomic footprints of host adaptation, introgression and recombination in coffee leaf rust. 

Molecular Plant Pathology, 19(7), 1742-1753. DOI:https://doi.org/10.1111/mpp.12657 (IF2018 4,379; Q1 Plant Sciences)

Pina-Martins, F., Silva, D.N., Fino, J. & Paulo, O.S. (2017) Structure_threader: an improved method for automation parallelization of programs structure, fastStructure and MavericK on multicore CPU systems.

Molecular Ecology Resources, 17(6), e268-e274. DOI:10.1111/1755-0998.12702. (IF2017 7,059; Q1 Ecology)

Batista, D., Silva, D.N., Vieira, A., Cabral, A., Pires, A.S., Loureiro, A., Guerra-Guimarães, L., Pereira, A.P., Azinheira, H.G., Talhinhas, P., Silva, M.C. & Várzea, V. (2017) Legitimacy and implications of reducing Colletotrichum kahawae to subspecies in plant pathology.

Frontiers in Plant Science, 7, 2051. DOI:10.3389/fpls.2016.02051 (IF2017 3,678; Q1 Plant Sciences)

Talhinhas, P., Batista, D., Diniz, I., Vieira, A., Silva, D.N., Loureiro, A., Tavares, S., Pereira, A.P., Azinheira, H.G., Guerra-Guimarães, L., Várzea, V. & Silva, M.C. (2017) The Coffee Leaf Rust pathogen Hemileia vastatrix: one and a half centuries around the tropics.

Molecular Plant Pathology, 18(8), 1039-1051. DOI:10.1111/mpp.12512 (IF2017 4,188; Q1 Plant Sciences)

Silva, S.E., Silva, D.N., Almeida, T., Garcia, C.A., Paulo, O.S. & Sim-Sim, M. (2017) Age estimates of Frullania (Frullaniaceae, Porellales) main lineages: another example of rapid and recent diversification in liverwort evolution.

Systematics and Biodiversity, 15(2), 156-165. DOI:10.1080/14772000.2016.1217096 (IF2017 2,215; Q2 Biodiversity Conservation)

Romeiras, M.M., Vieira, A., Silva, D.N., Moura, M., Santos-Guerra, A., Batista, D., Duarte, M.C. & Paulo, O.S. (2016) Evolutionary and biogeographic insights on the Macaronesian Beta-Patellifolia species (Amaranthaceae) from a time-scaled molecular phylogeny.

PLOS One, 11, e0152456. DOI:10.1371/journal.pone.0152456 (IF2016 2,806; Q1 Multidisciplinary Sciences)

Silva, D.N., Duplessis, S., Talhinhas, P., Azinheira, H., Paulo, O.S. & Batista, D. (2015) Genomic patterns of positive selection at the origin of rust fungi.

PLOS One, 10(12), e0143959. DOI:10.1371/journal.pone.0143959 (IF2015 3,057; Q1 Multidisciplinary Sciences)
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